ft predict-m6a
This command predicts m6A sites from PacBio Fiber-seq data. The input is a PacBio HiFi BAM file with kinetics and the output is a BAM file with the predicted m6A sites encoded in the ML and MM tags.
Details on the algorithm for m6A prediction are described in this publication: https://doi.org/10.1101/gr.279095.124.