Cite

If you use fibertools in your research, please cite the following paper:

Jha, A., Bohaczuk, S. C., Mao, Y., Ranchalis, J., Mallory, B. J., Min, A. T., Hamm, M. O., Swanson, E., Dubocanin, D., Finkbeiner, C., Li, T., Whittington, D., Noble, W. S., Stergachis, A. B., & Vollger, M. R. (2024). DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools. Genome Research. https://doi.org/10.1101/gr.279095.124

If you use FIRE in your research, please cite the following paper:

Vollger, M. R., Swanson, E. G., Neph, S. J., Ranchalis, J., Munson, K. M., Ho, C.-H., Sedeño-Cortés, A. E., Fondrie, W. E., Bohaczuk, S. C., Mao, Y., Parmalee, N. L., Mallory, B. J., Harvey, W. T., Kwon, Y., Garcia, G. H., Hoekzema, K., Meyer, J. G., Cicek, M., Eichler, E. E., … Stergachis, A. B. (2024). A haplotype-resolved view of human gene regulation. bioRxiv. https://doi.org/10.1101/2024.06.14.599122